PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.5CX4U
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 222aa    MW: 25665.5 Da    PI: 6.9648
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.5CX4UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.94.8e-052274555
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                    +E++RR++++  +++L +ll     + + k+    ++ + kA++YIk+L+
  Aradu.5CX4U 22 RRLIEKKRRNHMRMLYSKLNSLLSMdHNSISLKRcHWLIDQVDKAINYIKNLE 74
                 5689*********************4445555556777999*********995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-81588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.8071773IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.76E-41778No hitNo description
Gene3DG3DSA:4.10.280.101.6E-62187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MDQLGSRSEA SPSSTNDKKI ERRLIEKKRR NHMRMLYSKL NSLLSMDHNS ISLKRCHWLI  60
DQVDKAINYI KNLEEKVKMA KEKRESLLGM GRNRTRGAGG LRDLSKPPQL MVHEMGSYLQ  120
IVMTCGLDSQ FIFSEIIRIL NEENIDVKSV KSSLVENSMH HVVHAEISQF LLQLGATKVS  180
ERLKRFVNEP TSEIELQSDH QLLDFEIDTD ELAELLDFLE EK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953840.11e-162PREDICTED: transcription factor ABA-INDUCIBLE bHLH-TYPE-like
TrEMBLA0A0B2RQ848e-71A0A0B2RQ84_GLYSO; Transcription factor bHLH36
TrEMBLI1LS398e-71I1LS39_SOYBN; Uncharacterized protein
TrEMBLK7KY291e-70K7KY29_SOYBN; Uncharacterized protein
STRINGGLYMA12G12880.12e-70(Glycine max)
STRINGGLYMA06G44660.24e-70(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-16bHLH family protein